Bas Vb
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34c3a8b4d6
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remove empty data points
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2014-04-16 15:22:47 +02:00 |
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Rob tB
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2d314aee6a
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created stub to parse ExtendedCompoundInfo from ChemSpider MassSpec API
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2014-04-16 15:21:33 +02:00 |
|
Rob tB
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7fc980befe
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chemspider should now only generate new Requests for wikipedia links from 'expert confirmed' synonyms
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2014-04-16 15:02:37 +02:00 |
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Bas Vb
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ce3105f3c1
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went to a general loop over all values, this way getting all elements from the Wikipedia infobox (except for those with a colspan, because these mess up)
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2014-04-16 14:56:32 +02:00 |
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Rob tB
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87282fc572
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new properties in parse_properties now use dictionary syntax
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2014-04-16 14:26:27 +02:00 |
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Rob tB
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93a6f098a9
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log messages are now DEBUG instead of WARNING
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2014-04-16 13:28:59 +02:00 |
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Bas Vb
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f1280dd66d
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get value not list from xpath
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2014-04-16 13:23:50 +02:00 |
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Rob tB
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c1b5f810cb
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unused Result properties are now empty string instead of None
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2014-04-16 11:53:59 +02:00 |
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Bas Vb
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d99548e3b6
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Added density, molar entropy and heat capacity
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2014-04-16 11:14:02 +02:00 |
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Bas Vb
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d778050f36
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Able to parse the weblinks to other databases, one example done
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2014-04-16 10:37:57 +02:00 |
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Jip J. Dekker
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9dcb150356
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Merge branch 'develop' into feature/chemspider-parser
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2014-04-16 10:24:52 +02:00 |
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Bas Vb
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cd1637b0fe
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Both Boiling point and melting point are now parsed from chemical Wikipedia pages, there's one error about different types of attributes in the Result-items, this needs to be fixed by cleaning up the retrieved data.
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2014-04-16 00:50:50 +02:00 |
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Bas Vb
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1ca3593ae1
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Parse is runnable now.
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2014-04-16 00:35:19 +02:00 |
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Jip J. Dekker
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61ca2520e3
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Added feed export functionality
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2014-04-15 19:40:54 +02:00 |
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RTB
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8e46762a9e
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fix: if no experimental data, return predicted acd/labs data instead of None
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2014-04-15 18:56:38 +02:00 |
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Jip J. Dekker
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ffb3861034
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Search for single compound, filename should be lowercase
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2014-04-15 18:49:30 +02:00 |
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RTB
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ff0eb309da
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ChemSpider parser now handles the Predicted - ACD/Labs tab for scraping properties
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2014-04-14 17:27:02 +02:00 |
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RTB
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2ae3ac9c51
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added parse_properties to scrape the Experimental Physico-chemical Properties table if it exists
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2014-04-14 13:09:14 +02:00 |
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RTB
|
31a63829f8
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chemspider parser now makes new synonym requests with the scraped synonyms
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2014-04-14 01:23:15 +02:00 |
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RTB
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e95df8eaa3
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ignore_list now contains the intended names instead of Result objects
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2014-04-14 01:20:24 +02:00 |
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RTB
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564dbc3292
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added ignore list to new_compound_request for synonyms found by chemspider parser
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2014-04-14 00:33:25 +02:00 |
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RTB
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b1b969a16c
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corrected usage of __spider variable
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2014-04-14 00:28:47 +02:00 |
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RTB
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0ad98905e3
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added scraping for wikipedia links in synonym tab
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2014-04-13 23:35:25 +02:00 |
|
RTB
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5565c28a1e
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moved parsing of synonyms to 'parse_synonyms' function
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2014-04-13 23:14:23 +02:00 |
|
RTB
|
859a18c61a
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added parsing of synonyms
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2014-04-12 22:27:28 +02:00 |
|
RTB
|
22fa67735d
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added parse_searchrequest function
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2014-04-12 19:41:36 +02:00 |
|
RTB
|
246463b450
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simplified debug output, WARNING label should be temporary
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2014-04-12 19:19:56 +02:00 |
|
RTB
|
423cb90a6a
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Merge branch 'develop' into feature/chemspider-parser
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2014-04-12 19:13:02 +02:00 |
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RTB
|
0e3ef9a792
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hardcoded ChemSpider API token into ChemSpider.py
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2014-04-08 16:14:47 +02:00 |
|
Bas Vb
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f9799c30d8
|
Parse is runnable now.
|
2014-04-08 14:59:09 +02:00 |
|
RTB
|
a4dc8c8711
|
corrected Chemspider parser to be a subclass of Parser
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2014-04-08 13:10:02 +02:00 |
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RTB
|
0da286c907
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created basic structure of ChemSpider search parser
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2014-04-08 12:08:45 +02:00 |
|
Jip J. Dekker
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e10ac12d04
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Merge branch 'develop' into feature/Wikipedia
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2014-04-08 11:45:23 +02:00 |
|
Jip J. Dekker
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da17a149c0
|
Spider is now able to handle none-request from parsers while handling new
compounds
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2014-04-08 11:42:43 +02:00 |
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Jip J. Dekker
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4b0c4acf96
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Updated the wikipedia parser as an rightful subclass of Parser
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2014-04-08 11:40:30 +02:00 |
|
Bas Vb
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f3807c3018
|
Fixed the errors, but still not able to run/test the parse() function
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2014-04-06 20:28:03 +02:00 |
|
Bas Vb
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add4a13a4d
|
Trying to make a start with the WikipediaParser, but I can't find out with the Scrapy website (or another way) what the structure of the file should be, and how I can test/run the crawling on a page.
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2014-04-06 18:02:09 +02:00 |
|
Nout van Deijck
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81a93c44bb
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added author
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2014-04-03 12:19:17 +02:00 |
|
Bas Vb
|
60c409da3d
|
New file and branch for the Wikipedia parser
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2014-04-03 12:05:06 +02:00 |
|
Bas Vb
|
b4ff4a3c3b
|
New file and branch for the Wikipedia parser
|
2014-04-03 12:00:27 +02:00 |
|
Jip J. Dekker
|
f6981057df
|
Changed everything to spaces
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2014-04-02 14:20:05 +02:00 |
|
Jip J. Dekker
|
7bc160f676
|
The spider is now able to start using the synonym generator
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2014-04-01 21:38:11 +02:00 |
|
Jip J. Dekker
|
683f8c09d4
|
Quick fix, python errors
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2014-04-01 21:12:54 +02:00 |
|
Jip J. Dekker
|
f93dc2d160
|
Added an structure to get requests for all websites for a new synonym
|
2014-04-01 21:07:36 +02:00 |
|
Jip J. Dekker
|
e39ed3b681
|
Added a way for parsers to access the spider.
|
2014-04-01 20:56:32 +02:00 |
|
Jip J. Dekker
|
4d9e5307bf
|
Written an loader for all parsers in the parser directory.
|
2014-03-31 00:48:45 +02:00 |
|
Jip J. Dekker
|
0cc1b23353
|
Added the functionality to add parsers and automatically use them.
|
2014-03-30 23:37:42 +02:00 |
|
Jip J. Dekker
|
14c27458fc
|
Fixed an import error
|
2014-03-30 23:07:28 +02:00 |
|
Jip J. Dekker
|
32cedecf2e
|
Added an basic parser class to extend, next step implementing the global function
|
2014-03-28 14:44:17 +01:00 |
|
Jip J. Dekker
|
87d1041517
|
Made all Python files PEP-8 Compatible
|
2014-03-28 14:11:36 +01:00 |
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