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375 Commits

Author SHA1 Message Date
Bas Vb
62475d965d Cleaning up code 2014-04-23 15:24:57 +02:00
Nout van Deijck
3e1b33164e Some comments and trying different for loop for adding requests 2014-04-23 13:48:44 +02:00
Nout van Deijck
1ced65e2b6 Parser now adds extra requests for every identifier to an external source that is in the Wikipedia chembox 2014-04-23 13:18:50 +02:00
Nout van Deijck
b5c83125f7 Added extra request for chemspider link retreived from Wikipedia 2014-04-23 12:27:53 +02:00
Bas Vb
f926f86d7d Small fix because the cleaned up items were not send back 2014-04-23 12:14:20 +02:00
Nout van Deijck
6dd03c293a Added check for already visited redirects of compounds 2014-04-23 12:08:33 +02:00
Bas Vb
cb299df96f Added log statements 2014-04-23 11:46:43 +02:00
Bas Vb
fd5faf22e4 Added empty reliability and condition to prevent errors for now 2014-04-23 11:12:58 +02:00
Bas Vb
1c518af5a6 Remove per attribute getfunctions 2014-04-23 11:06:59 +02:00
Jip J. Dekker
b44ab49255 Merge branch 'develop' into feature/parser-selection
Conflicts:
	fourmi.py
2014-04-22 19:27:49 +02:00
Jip J. Dekker
bf3ec069ef Merge branch 'release/v0.2.0' into develop 2014-04-22 19:11:01 +02:00
Jip J. Dekker
23189499e6 Merge branch 'release/v0.2.0' v0.2.0 2014-04-22 19:10:51 +02:00
Jip J. Dekker
67bc3f3144 Bumped the version number 2014-04-22 19:10:24 +02:00
Jip J. Dekker
53049330e9 Merge pull request #1 from Recondor/feature/chemspider-parser
Feature/chemspider parser
2014-04-22 19:05:42 +02:00
Jip J. Dekker
595af7aa32 PEP-8 and fixed a bug in set_spider 2014-04-22 19:03:29 +02:00
Jip J. Dekker
ba7bed0250 Disabled name mangling for the spider reference in the parsers 2014-04-22 18:55:14 +02:00
Jip J. Dekker
648b23e466 PEP-8 standards for a lot of things 2014-04-22 18:54:10 +02:00
Jip J. Dekker
0da2d74e2c PEP-8 indentation for multi-line statements 2014-04-22 18:46:49 +02:00
Jip J. Dekker
7a1e99605b Uniform TODO tags, indentation faults. 2014-04-22 18:40:14 +02:00
Bas Vb
b0146cdce8 Added regular expressions to clean up temperature data 2014-04-22 09:46:19 +02:00
RTB
63fb9f4733 added comment to parse_searchrequest and added optional todo for extract()[0] usage 2014-04-18 17:33:00 +02:00
RTB
3c5dbc44dc added comments for chemspider parse_extendedinfo 2014-04-18 17:14:19 +02:00
RTB
2ac6d1711d added comments for chemspider new_synonym 2014-04-18 17:11:04 +02:00
RTB
3862bfb7d8 added comments for ChemSpider class, parse_properties, and parse_synonyms 2014-04-18 16:54:30 +02:00
RTB
f18f23dfc6 chemspider new_compound_request is now PEP-8 compliant 2014-04-18 16:20:47 +02:00
RTB
074fbdf9e2 changed source for properties by parse_extendedinfo to 'ChemSpider ExtendedCompoundInfo' 2014-04-18 16:13:44 +02:00
RTB
fa22356cb2 chemspider parse_extendedinfo is now PEP-8 compliant 2014-04-18 16:12:07 +02:00
RTB
479182d77e chemspider new_synonym is now PEP-8 compliant 2014-04-18 16:07:06 +02:00
RTB
319e028717 chemspider parse_properties a bit more PEP-8 compliant 2014-04-18 15:55:04 +02:00
RTB
9aae8d2d07 chemspider parse_properties is now PEP-8 compliant, hopefully 2014-04-18 15:38:07 +02:00
RTB
c1c7cfc117 edited global strings to be consistent (PEP-8) 2014-04-18 15:12:22 +02:00
RTB
f2cacb79eb properties from Predicted - ACD/Labs tab now include conditions from value variable 2014-04-18 15:03:06 +02:00
RTB
3bf8dccf18 properties from Predicted - ACD/Labs tab now include conditions from attribute variable 2014-04-18 14:59:56 +02:00
RTB
cd8a64816f removed colon at end of attributes in Experimental and Predicted ACD/labs tabs 2014-04-18 14:10:53 +02:00
RTB
22c765b6e5 simplified setting of Results for Predicted ACD/Labs tab 2014-04-18 14:08:48 +02:00
RTB
75d248e6cf changed for loop in parse_properties to use zip instead of enumerate 2014-04-18 13:45:32 +02:00
RTB
bf4a5bb41f added scraping of synonyms labeled as 'synonym_cn' 2014-04-18 13:36:33 +02:00
RTB
a4a21f2578 changed default reliability from empty string to Unknown as per UML design 2014-04-18 13:19:05 +02:00
RTB
9389af99ba removed manual Requests for wikipedia URLs as wikipedia parser handles those through synonyms 2014-04-18 13:17:24 +02:00
RTB
ae21fa7c67 chemspider now scrapes for reference data on synonyms 2014-04-18 13:16:22 +02:00
RTB
119d48890d fixed conditional for emitting synonyms, it compiles again 2014-04-18 12:14:54 +02:00
Jip J. Dekker
000bc556ec Merge branch 'develop' into feature/parser-selection
Conflicts:
	fourmi.py
2014-04-17 23:44:00 +02:00
RTB
04751b6670 chemspider parser now only emits synonyms labeled as 'English' 2014-04-17 22:47:43 +02:00
RTB
ce5eeb56a6 added scraping of synonym language 2014-04-17 22:37:37 +02:00
RTB
4f2c046c9c rewrote parse_synonyms and new_synonym to use an internal dictionary structure 2014-04-17 22:06:45 +02:00
RTB
2e95d35283 modified parse_synonyms and new_synonym to include a Selector for future edits 2014-04-17 21:30:53 +02:00
Bas Vb
be63315ca2 regex 2014-04-16 17:01:35 +02:00
Jip J. Dekker
bd7fb38497 Merge branch 'feature/chemspider-parser' of code.giphouse.nl:giphouse/descartes-2 into feature/chemspider-parser 2014-04-16 17:01:09 +02:00
Jip J. Dekker
3aaed985fe Merge branch 'develop' into feature/chemspider-parser 2014-04-16 17:00:59 +02:00
Jip J. Dekker
873231439c Merge branch 'develop' into feature/Wikipedia 2014-04-16 16:59:25 +02:00