Dekker1/Fourmi
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  • 4672903c9b The logging now using the scrapy setting overrides Jip J. Dekker 2014-06-15 19:50:31 +02:00
  • 2eb8f3e0af Changed logging CL option Jip J. Dekker 2014-06-15 19:38:52 +02:00
  • ee7f1ab739 Updated the Objectives and linkage to the wiki Jip J. Dekker 2014-06-15 19:26:13 +02:00
  • 7838ff2773 Number of small changes Harmen Prins 2014-06-12 15:41:50 +02:00
  • 534ca0dcea Added imports to __init__'s Harmen Prins 2014-06-12 15:05:59 +02:00
  • 8cf48e6702 GUI more robust and tests work Harmen Prins 2014-06-12 14:49:28 +02:00
  • 9436ccbbe2 Added another test Harmen Prins 2014-06-12 13:38:06 +02:00
  • a284a5f558 Imported fourmi via gui_launcher Harmen Prins 2014-06-12 12:57:30 +02:00
  • ad8e3d07cd Added tests Harmen Prins 2014-06-12 12:50:20 +02:00
  • c0727a2ac7 Added launcher in main folder Harmen Prins 2014-06-12 12:49:24 +02:00
  • 8836cdf16b fixed config errors due to merge with develop RTB 2014-06-11 18:39:01 +02:00
  • 830b785b0a trying to merge pubchem with develop cause fourmi on my current branch was broken Nout van Deijck 2014-06-11 17:36:17 +02:00
  • b0a51da18e gui now calls fourmi.search correctly Harmen Prins 2014-06-11 17:05:26 +02:00
  • a903e78f9e added PubChem to sources.cfg Nout van Deijck 2014-06-11 16:40:32 +02:00
  • f104740566 cleaned up useless code Nout van Deijck 2014-06-11 16:39:00 +02:00
  • aeb7366161 Changed path to config file Harmen Prins 2014-06-11 16:37:58 +02:00
  • 71d4171b1f Changed paths so it works Harmen Prins 2014-06-11 16:10:52 +02:00
  • fa98caa8b4 Now it runs Harmen Prins 2014-06-11 15:59:50 +02:00
  • 111073cb15 Added first test Harmen Prins 2014-06-11 15:58:00 +02:00
  • 8bc142e4dd Merge remote-tracking branch 'origin/develop' into feature/GUI Harmen Prins 2014-06-11 15:14:04 +02:00
  • 00bd2d56a3 Merge branch 'master' into feature/GUI Harmen Prins 2014-06-11 15:13:22 +02:00
  • bd12216ad4 Merge branch 'feature/GUI' of https://github.com/Recondor/Fourmi into feature/GUI Harmen Prins 2014-06-11 15:13:16 +02:00
  • b97a7e22d4 A number of tiny changes Harmen Prins 2014-06-11 15:12:33 +02:00
  • d149bc127b Merge branch 'master' into feature/GUI Harmen Prins 2014-06-11 15:11:30 +02:00
  • a1859f2ec2 final documentation Bas Vb 2014-06-10 22:46:50 +02:00
  • de474fea31 small fixes Bas Vb 2014-06-10 22:42:45 +02:00
  • e9a5fc08e5 Splitting up parse function Bas Vb 2014-06-10 22:41:32 +02:00
  • 6621b3028c small typography Bas Vb 2014-06-10 22:32:03 +02:00
  • bfa78f4697 Clean up documentation in Wikipedia parsers Bas Vb 2014-06-10 22:30:59 +02:00
  • 0fab626a55 moved import and removed TODO RTB 2014-06-10 14:07:02 +02:00
  • b4a724392b moved scraping of experimental data tab to its own function RTB 2014-06-10 14:04:39 +02:00
  • 41bbe5b1de moved scraping of Predicted - ACD/Labs tab to its own function RTB 2014-06-10 13:57:10 +02:00
  • 5e13af5b1b added function comments to ChemSpider RTB 2014-06-10 13:42:49 +02:00
  • a15a66cc77 made get_unit function RTB 2014-06-10 13:13:24 +02:00
  • 7879d523ec removed unneeded class variable cfg RTB 2014-06-10 13:02:39 +02:00
  • 1b7c0b44a9 moved identifying and distribution of parsing of tables to a new function parse_tables RTB 2014-06-10 13:01:47 +02:00
  • 9c34267fb1 added function comments to NIST RTB 2014-06-10 12:49:00 +02:00
  • cb53c3941d Merge branch 'release/v0.5.0' into develop Jip J. Dekker 2014-06-08 22:39:59 +02:00
  • 16248577b0 Merge branch 'release/v0.5.0' v0.5.0 Jip J. Dekker 2014-06-08 22:39:53 +02:00
  • e7da0bb177 Bumped version number Jip J. Dekker 2014-06-08 22:39:27 +02:00
  • 1ab7d0ba76 Merge branch 'feature/sources-configuration' into develop Jip J. Dekker 2014-06-08 22:36:02 +02:00
  • 326413effa fixed syntax of erronous assertIn and assertIsInstance commands RTB 2014-06-08 21:42:38 +02:00
  • a43d90ae69 replaced erronous ConfigReader with ConfigParser... RTB 2014-06-08 21:26:17 +02:00
  • d141bb9f4f replaced erronous equality signs with commas RTB 2014-06-08 21:19:58 +02:00
  • 8cb6bb8d41 added simple tests for read_sourceconfiguration and get_section RTB 2014-06-08 21:13:35 +02:00
  • a62b40a21f get_section in configurator returns the default section if the requested section does not exist RTB 2014-06-08 20:16:30 +02:00
  • 806b816c30 removed test for existence of reliability in config from WikipediaParser init RTB 2014-06-08 19:31:34 +02:00
  • bbc9abadb8 removed test for existence of reliability in config from NIST init RTB 2014-06-08 19:30:59 +02:00
  • f01ff62d99 removed test for existence of reliability in config from chemspider init RTB 2014-06-08 19:30:05 +02:00
  • a6fb27f8a7 the difference between class and object variables... RTB 2014-06-08 19:29:29 +02:00
  • 09ab4249ba added function descriptions of read_sourceonfiguration and get_section RTB 2014-06-08 19:21:56 +02:00
  • 3278de2b3a made sourceloader use static Configurator methods RTB 2014-06-08 19:15:07 +02:00
  • f93ff4a309 made read_sourceconfiguration() and get_section() static RTB 2014-06-08 19:14:33 +02:00
  • 87ec6e6506 added read_sourceconfiguration function RTB 2014-06-08 19:03:01 +02:00
  • 96a7f5acd4 added get_section function to grab sections from sources.cfg RTB 2014-06-08 18:52:29 +02:00
  • 4f49e5cf8b Merge branch 'develop' into feature/sources-configuration RTB 2014-06-08 17:53:47 +02:00
  • efb7d60079 Merge branch 'feature/restructure' into develop Jip J. Dekker 2014-06-08 13:34:09 +02:00
  • 98c3fbc590 Link of to the right page (Github name change) Jip J. Dekker 2014-06-08 13:33:57 +02:00
  • efa8d45d9c I don't yet know a way to test the start_log function Jip J. Dekker 2014-06-08 13:28:14 +02:00
  • a1dd39f92a Made CSV our default format, as it's probably the most likely to be used. Jip J. Dekker 2014-06-08 13:12:35 +02:00
  • 351a7d08ea Added tests for the configurator Jip J. Dekker 2014-06-08 13:10:18 +02:00
  • 683de68fb7 Added tests and fixed the output settings Jip J. Dekker 2014-06-08 13:08:37 +02:00
  • c4ef75cf57 Uniform naming of result file Jip J. Dekker 2014-06-08 13:00:32 +02:00
  • 51239dd342 Added a few lines on the configurator itself. Jip J. Dekker 2014-06-08 12:47:57 +02:00
  • d765e7fce4 Edited the documentation of the functions in the configurator Jip J. Dekker 2014-06-08 12:46:50 +02:00
  • 90129f41cc Added the configuration of the scrapy settings as a new module Jip J. Dekker 2014-06-08 12:42:21 +02:00
  • 007549aad8 Github Username Change Jip J. Dekker 2014-06-08 12:40:07 +02:00
  • ee80c6eaa0 We don't want to check coverage for code we didn't write Jip J. Dekker 2014-06-08 12:13:04 +02:00
  • 7cafdac7a0 Test all python files Jip J. Dekker 2014-06-08 12:08:02 +02:00
  • edc91c2279 Sourceloader should import dynamically Jip J. Dekker 2014-06-08 12:04:33 +02:00
  • 071018cbac Made a different python package for all helpers/utils Jip J. Dekker 2014-06-08 11:42:01 +02:00
  • cbab2ac7a4 The difference between class and object variables Jip J. Dekker 2014-06-07 12:21:00 +02:00
  • 13305f400b Added coverage to the README.md Jip J. Dekker 2014-06-07 11:57:59 +02:00
  • b847d2d591 replaced ChemSpider() with NIST() due to token issues RTB 2014-06-06 23:49:38 +02:00
  • 012267c31c fixed result in parse_aggregate_data RTB 2014-06-06 23:32:03 +02:00
  • a12add5e4c removed @staticmethod from parse_extendedinfo RTB 2014-06-06 23:29:32 +02:00
  • 4eeabd7aba removed erronous @staticmethod for parse_properties RTB 2014-06-06 23:16:22 +02:00
  • 5b871de987 Merge branch 'feature/sources-configuration' of github.com:Recondor/Fourmi into feature/sources-configuration RTB 2014-06-06 23:11:53 +02:00
  • c9f902993c Merge branch 'develop' into feature/sources-configuration Jip J. Dekker 2014-06-06 22:31:49 +02:00
  • 96e41868bd Merge branch 'hotfix/no-requests' into develop Jip J. Dekker 2014-06-06 22:28:20 +02:00
  • a1f6313b33 Merge branch 'hotfix/no-requests' no-requests Jip J. Dekker 2014-06-06 22:27:10 +02:00
  • e0df310de7 Test if it's of Request type Jip J. Dekker 2014-06-06 22:26:42 +02:00
  • 073e5a12bb Fixed the test to actually test if there are requests Jip J. Dekker 2014-06-06 22:24:49 +02:00
  • 321295a395 Fixed the synonym requests function for the start requests Jip J. Dekker 2014-06-06 22:22:29 +02:00
  • 30f00b676d updated parse to use newresult function RTB 2014-06-06 20:16:25 +02:00
  • 69664d3ac0 added newrresult function to WikipediaParser.py RTB 2014-06-06 19:30:31 +02:00
  • 68139b4839 added config to wikipedia along with reliability check RTB 2014-06-06 19:27:27 +02:00
  • 981615c6b3 chemspider __init__ now sets reliability to empty string if it does not exist in config RTB 2014-06-06 19:14:24 +02:00
  • f6f5c5f6fe added config to NIST along with reliability check RTB 2014-06-06 19:13:25 +02:00
  • a77eafe513 updated parse_generic_info to use newresult function RTB 2014-06-06 19:08:22 +02:00
  • 80770de5c0 updated parse_aggregate_data to use newresult function RTB 2014-06-06 19:06:22 +02:00
  • c49d76cb66 updated parse_transition_data to use newresult function RTB 2014-06-06 19:03:51 +02:00
  • ed53889018 updated parse_generic_data to use newresult function RTB 2014-06-06 19:00:04 +02:00
  • a272f9f6d6 updated parse_antoine_data to use newresult function RTB 2014-06-06 18:58:33 +02:00
  • e347b7538d updated parse_individidual_datapoints to use newresult function RTB 2014-06-06 18:54:38 +02:00
  • de21891bff created newresult function in NIST.py RTB 2014-06-06 18:52:18 +02:00
  • 0021953a9a updated parse_properties to use newresult function RTB 2014-06-06 18:20:29 +02:00
  • b3b879d2ad updated parse_extendedinfo to use the newresult function RTB 2014-06-06 18:17:55 +02:00
  • 755c981efa created newresult function that uses the config for reliability RTB 2014-06-06 18:12:31 +02:00
  • 217fb3e9cd ChemSpider now uses the token from sources.cfg with checks RTB 2014-06-06 16:17:46 +02:00