RTB
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4f2c046c9c
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rewrote parse_synonyms and new_synonym to use an internal dictionary structure
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2014-04-17 22:06:45 +02:00 |
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RTB
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2e95d35283
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modified parse_synonyms and new_synonym to include a Selector for future edits
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2014-04-17 21:30:53 +02:00 |
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Jip J. Dekker
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bd7fb38497
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Merge branch 'feature/chemspider-parser' of code.giphouse.nl:giphouse/descartes-2 into feature/chemspider-parser
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2014-04-16 17:01:09 +02:00 |
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Jip J. Dekker
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3aaed985fe
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Merge branch 'develop' into feature/chemspider-parser
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2014-04-16 17:00:59 +02:00 |
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Jip J. Dekker
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d603e388e6
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Merge branch 'hotfix/1-searchable' into develop
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2014-04-16 16:58:53 +02:00 |
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Jip J. Dekker
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ab2a3fdc08
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typo!
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2014-04-16 16:57:27 +02:00 |
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Jip J. Dekker
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f0d10902b5
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Searchable can't be a list!
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2014-04-16 16:57:08 +02:00 |
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Rob tB
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9a78e186bc
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chemspider parser now grabs data from ExtendedCompoundInfo() of chemspider API (no units)
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2014-04-16 16:22:47 +02:00 |
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Rob tB
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caf7d3df4e
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fixed ExtendedCompoundInfo url to have csid parameter instead of query
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2014-04-16 15:27:10 +02:00 |
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Rob tB
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2d314aee6a
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created stub to parse ExtendedCompoundInfo from ChemSpider MassSpec API
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2014-04-16 15:21:33 +02:00 |
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Rob tB
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7fc980befe
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chemspider should now only generate new Requests for wikipedia links from 'expert confirmed' synonyms
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2014-04-16 15:02:37 +02:00 |
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Rob tB
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87282fc572
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new properties in parse_properties now use dictionary syntax
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2014-04-16 14:26:27 +02:00 |
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Rob tB
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93a6f098a9
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log messages are now DEBUG instead of WARNING
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2014-04-16 13:28:59 +02:00 |
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Rob tB
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c1b5f810cb
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unused Result properties are now empty string instead of None
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2014-04-16 11:53:59 +02:00 |
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Jip J. Dekker
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9dcb150356
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Merge branch 'develop' into feature/chemspider-parser
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2014-04-16 10:24:52 +02:00 |
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Jip J. Dekker
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6799a1a956
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Merge branch 'release/v0.1.0' into develop
1-searchable
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2014-04-15 19:49:07 +02:00 |
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Jip J. Dekker
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2d5e39de81
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Merge branch 'release/v0.1.0'
v0.1.0
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2014-04-15 19:48:55 +02:00 |
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Jip J. Dekker
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972e5da0d2
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Removed debug code and typos.
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2014-04-15 19:48:27 +02:00 |
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Jip J. Dekker
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d770f79a7a
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Bumped version number
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2014-04-15 19:46:10 +02:00 |
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Jip J. Dekker
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878d8e5efb
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Merge branch 'feature/CLI' into develop
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2014-04-15 19:44:41 +02:00 |
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Jip J. Dekker
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61ca2520e3
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Added feed export functionality
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2014-04-15 19:40:54 +02:00 |
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Jip J. Dekker
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e65d3a6898
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Added the options for the Feed exports
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2014-04-15 18:57:51 +02:00 |
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RTB
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8e46762a9e
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fix: if no experimental data, return predicted acd/labs data instead of None
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2014-04-15 18:56:38 +02:00 |
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Jip J. Dekker
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ffb3861034
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Search for single compound, filename should be lowercase
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2014-04-15 18:49:30 +02:00 |
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Jip J. Dekker
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a4dd6e1835
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Made logging work
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2014-04-14 21:31:20 +02:00 |
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Jip J. Dekker
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2ad33080c6
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First setup of the CLI, decided on a structure
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2014-04-14 20:45:07 +02:00 |
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Jip J. Dekker
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ee01e697d3
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Added Docopt as an CLI framework
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2014-04-14 20:21:41 +02:00 |
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RTB
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ff0eb309da
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ChemSpider parser now handles the Predicted - ACD/Labs tab for scraping properties
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2014-04-14 17:27:02 +02:00 |
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RTB
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2ae3ac9c51
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added parse_properties to scrape the Experimental Physico-chemical Properties table if it exists
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2014-04-14 13:09:14 +02:00 |
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RTB
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31a63829f8
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chemspider parser now makes new synonym requests with the scraped synonyms
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2014-04-14 01:23:15 +02:00 |
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RTB
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e95df8eaa3
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ignore_list now contains the intended names instead of Result objects
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2014-04-14 01:20:24 +02:00 |
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RTB
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564dbc3292
|
added ignore list to new_compound_request for synonyms found by chemspider parser
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2014-04-14 00:33:25 +02:00 |
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RTB
|
b1b969a16c
|
corrected usage of __spider variable
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2014-04-14 00:28:47 +02:00 |
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RTB
|
0ad98905e3
|
added scraping for wikipedia links in synonym tab
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2014-04-13 23:35:25 +02:00 |
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RTB
|
5565c28a1e
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moved parsing of synonyms to 'parse_synonyms' function
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2014-04-13 23:14:23 +02:00 |
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RTB
|
859a18c61a
|
added parsing of synonyms
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2014-04-12 22:27:28 +02:00 |
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RTB
|
22fa67735d
|
added parse_searchrequest function
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2014-04-12 19:41:36 +02:00 |
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RTB
|
246463b450
|
simplified debug output, WARNING label should be temporary
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2014-04-12 19:19:56 +02:00 |
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RTB
|
423cb90a6a
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Merge branch 'develop' into feature/chemspider-parser
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2014-04-12 19:13:02 +02:00 |
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RTB
|
0e3ef9a792
|
hardcoded ChemSpider API token into ChemSpider.py
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2014-04-08 16:14:47 +02:00 |
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RTB
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a4dc8c8711
|
corrected Chemspider parser to be a subclass of Parser
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2014-04-08 13:10:02 +02:00 |
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RTB
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0da286c907
|
created basic structure of ChemSpider search parser
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2014-04-08 12:08:45 +02:00 |
|
Jip J. Dekker
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debbc5e62a
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Merge branch 'hotfix/none-requests' into develop
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2014-04-08 11:44:42 +02:00 |
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Jip J. Dekker
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199fa5419e
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Merge branch 'hotfix/none-requests'
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2014-04-08 11:44:26 +02:00 |
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Jip J. Dekker
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622dd4ad00
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Small fix to ensure unique classes and load all parsers
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2014-04-08 11:43:32 +02:00 |
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Jip J. Dekker
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da17a149c0
|
Spider is now able to handle none-request from parsers while handling new
compounds
|
2014-04-08 11:42:43 +02:00 |
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Jip J. Dekker
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3a074467e6
|
Merge branch 'hotfix/No_TABs' into develop
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2014-04-02 14:22:13 +02:00 |
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Jip J. Dekker
|
9805bb5adb
|
Merge branch 'hotfix/No_TABs'
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2014-04-02 14:21:34 +02:00 |
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Jip J. Dekker
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f6981057df
|
Changed everything to spaces
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2014-04-02 14:20:05 +02:00 |
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Jip J. Dekker
|
595f0253e2
|
Merge branch 'release/v0.0.1' into develop
|
2014-04-01 21:44:31 +02:00 |
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